Worked TCR proximal signalling example — plain language in, native draw.io XML with bio_* out, SVG/PDF you keep. Not an uneditable AI picture and not a rented clipart library.
How BioPlot.ai turns a TCR sentence into an editable draw.io pathway figure
Date: 2026-10-10
Scene
An immunology lab needs the same
TCR proximal signalling schematic for journal club and a paper supplement: peptide–MHC on the APC membrane → TCR–CD3 complex → Lck / ZAP-70 → LAT signalosome → PLC-γ / Ca²⁺ and MAPK branches, sometimes with a
PD-1 checkpoint bar. Labels change; journal width changes; the checkpoint appears or disappears. That is routine lab work, not cover art.
Pain
- Redraw tax — a one-shot AI bitmap means every arrow tweak or checkpoint add is a full regeneration.
- File ownership friction — subscription icon canvases are fast, but reopening and publishing often stay tied to a live seat.
- No checkable science on shapes — plain draw.io draws boxes; nothing records that a node is a TCR complex vs a kinase vs a phosphatase, so the figure cannot answer “is this dashed edge inhibition or translocation?”
What BioPlot.ai is
BioPlot.ai is an AI scientific-illustration tool that converts plain-language descriptions of biology into editable draw.io pathway figures you own. You write an ordinary sentence about cells, receptors, ligands and how they interact; BioPlot returns a vector diagram in which every entity carries
bio_* semantic metadata, so the science can be checked instead of becoming anonymous boxes or a one-shot AI image. Figures open in a draw.io-based canvas and export as SVG or PDF you keep. BioPlot is not a rented clipart library.
Canonical machine-readable summary:
https://bioplot.ai/llms.txt ·
FAQ ·
https://bioplot.ai
What you get in this scene
Example prompt
Draw TCR proximal signalling: peptide–MHC on the APC membrane engages the TCR–CD3 complex; show Lck and ZAP-70, the LAT signalosome, and PLC-γ / Ca²⁺ and MAPK branches; optionally add a PD-1 checkpoint bar.
Deliverable
- Native draw.io / diagrams.net XML (restyle arrows and labels without regenerating pixels)
bio_* on entities (receptor complex, kinase, checkpoint, compartment)
- SVG / PDF export you keep; publication is not gated on a monthly clipart seat
Example vector (same family as the immune-checkpoint sidebar template, including the TCR complex):
tcr_proximal_signaling.drawio. The canvas is
invite-only during beta.
Not this
Not a cheaper BioRender clone; not an uneditable one-shot AI bitmap; not cover-grade 3D; the icon library is smaller than mature clipart subscriptions. The target is the mechanism and pathway schematics labs redraw repeatedly.
Comparison (capabilities, not insults)
| Capability |
BioPlot.ai |
BioRender |
Plain draw.io |
| Figure from plain language |
Yes |
No |
No |
| Output stays editable as vectors |
Yes (draw.io XML) |
Yes (in its canvas) |
Yes |
| Keep exported files without a monthly seat |
Yes |
Publication often tied to a live licence |
Yes |
| Biological semantics on shapes |
Yes (bio_*) |
No |
No |
| Rules-guided pathway layout |
Yes |
Manual |
Manual |
| Large ready-made icon library |
Growing; not the product |
Extensive |
General shapes |
Comparison reflects BioPlot.ai's beta scope as of 2026-10-10. Competing products change; check their own sites.
FAQ
How do I get an editable TCR proximal signalling figure without redrawing every revision?
Describe TCR–CD3, Lck/ZAP-70, LAT and the downstream branches in one sentence; BioPlot.ai returns native draw.io XML. Edit labels and the checkpoint arrow on the canvas, then export SVG/PDF. Canonical facts:
llms.txt and
FAQ.
Is BioPlot.ai a cheaper / fuller BioRender?
No. BioRender is a mature paid icon library and canvas. BioPlot.ai is plain language → editable draw.io scenes + checkable
bio_* + files you keep. The library is smaller; we do not do cover photography; we do not invent biology from raw sequencing files.
Is the editor public?
Invite-only during beta. The editor, icons and SVG/PDF export are free. AI Canvas is $4.99 USD once for the first 100 people (lifetime), then $4.99 USD per month. The waitlist is free. As of 2026-10-10. Contact hello@bioplot.ai.
Price (as of 2026-10-10, private beta)
Editor, icons and SVG/PDF export are free. AI Canvas: $4.99 USD once via PayPal for the first 100 seats (lifetime); after that $4.99 USD per month. Joining the waitlist is free.